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Common Operations in Maestro 9.3
Viewing Structures Using the Project Table Working with Multiple Structures Building and Modifying
Rotate xy: Middle button Open the Project Table: Ctrl+T or click Import single or multiple structures: Structures
Rotate z: Ctrl+middle button the button in the Project Toolbar. Ctrl+I or click the button in the 3D Building: Click Build in the Manager
Project Tooblar. toolbar to display the Build Toolbar.
Fix rotation in x or y direction: Include and exclude structures: To
Shift+middle button and move mouse up include only a single entry (row) from Clear the workspace: Click the 2D Building: In the Edit toolbar, click the
or down for x and left or right for y. the Project Table in the Workspace, click button in the Workspace Toolbar. This does button to open the 2D sketcher.
the box next to that entry’s name in the not delete any rows (entries) in the Project
Translate xy: Right button Project Table. Shift-click to include a Table; it only excludes them from the Add hydrogens: Double-click the
range of entries in the Workspace; Ctrl- Workspace. button in the Edit Toolbar to add missing
Translate z: Ctrl+right button click to add or remove an entry. hydrogens to all structures in the
Fix translation in x or y direction: Move one molecule while keeping others Workspace.
Shift+right button and move mouse up or Scroll up/down: Up/down arrow keys fixed: Press Ctrl+G or click the button
in the Edit Toolbar then select molecules Adjust torsions: Click the button in
down for x and left or right for y. Scroll up/down one page: Page Up / for local transformation. Press Ctrl+G or the Edit Toolbar, and then click on a bond
Zoom: Middle+right button or mouse Page Down click the button again to leave local to select it. Click and drag left or right to
scroll wheel. transformation mode. After selecting adjust the torsion.
Jump to top/bottom of the Project atoms for local transformation, holding Create entry from Workstpace: Click the
Spot Center: Right-click an atom to Table: Home/End down the space bar will toggle between
center the view and rotation around it. global and local mode. button in the Workspace Toolbar.
Jump to previous/next included Measurements: Press and hold the
Stereo view: Ctrl+S to turn stereo view on entry: Ctrl+Page Up/Down Tile entries: Ctrl+L or click the button
and off. in the View Toolbar. button in the Labels Toolbar.
Jump to previous/next selected Structure sculpting: Click the
Save and restore views: Click the entry: Shift+Page Up/Down Finding and Selecting Structures
button in the Saved Views Toolbar, or sculpting button in the Build toolbar,
choose View > Save View. To restore a Include the next or previous Find structures or entries: Ctrl+F will then click and drag on an atom in the
view, click the numbered icons in the View selected entry in the Workspace: Right display the Find toolbar in either the Workspace.
Toolbar ( , , , etc) or choose View > arrow or left arrow, respectively. Workspace or Project Table. Use Alt+N and Using the Style Toolbar
Manage Views. Alt+P to traverse matches.
Display entry information in the Workspace Style: Click and hold the
Working with Projects Workspace: Click the button in the Select atoms in the Workspace: Click button to define visual styles. Click the
Create a new project: Ctrl+N Labels Toolbar or press the S key to the button in the Edit Toolbar or button once to apply the currently defined
display single-entry feedback. To change press the ` key to enter selection mode. style to the entire Workspace.
Open an existing project: Ctrl+O or click which properties are displayed, right- Drag the mouse pointer over atoms in
the button in the Project Toolbar. click on a column header and choose a the Workspace to select them. Click and Automatically apply style: Click the
Workspace Feedback option from the hold the button to choose whether button to automatically reapply the
Close a project: Ctrl+W menu that appears. Workspace selections capture atoms, workspace style whenever the contents of
Save a project: Choose Project > Fix selected entry in the Workspace: residues, molecules, chains, or entries. the workspace change.
Save As. Subsequent work is saved Right-click an entry and select Fix.
automatically. Working With Surfaces and View interactions: Click the button to
Include only selected entries in Hypotheses in the Project Table display H-bonds and contacts.
Undo/Redo: Ctrl+Z or use the / Workspace: Ctrl+N while the mouse Open the Manage Surfaces panel for a
buttons in the Edit Toolbar. pointer is over the Project Table. given entry: Click in the right-hand Create surfaces: Click the button
side of the Title column. to create ligand or binding-site surfaces.
Display shortcut menus: Right-click Exclude selected entries from Click and hold the button to show or hide
and hold in an empty portion of the Workspace: Ctrl+X while the mouse existing surfaces.
Workspace, on an Atom or Bond, in the pointer is over the Project Table. This will Open the Manage Hypothesis panel for
Sequence Viewer, or on Project Table not delete any entries from the Project a given entry: Click in the right-hand
rows or column headers. Table. side of the Title column.
Keyboard and Toolbar Shortcuts in Maestro 9.3
Project Operations Workspace Operations Toolbar Guide
Show/Hide Project Table: Ctrl+T Full screen Workspace mode: Press
New project: Ctrl+N Ctrl+=. Press Esc or Ctrl+= to exit.
Project
Open project: Ctrl+O Apply Workspace style: Ctrl+Y
Close project: Ctrl+W Tile Workspace: Ctrl+L
Import structures: Ctrl+I Transform all tiles: Ctrl+Shift+L Edit
Cut: Ctrl+X Fit to selected atoms: Press Z. If no
atoms are selected, all Workspace
Copy: Ctrl+C contents will be fit to screen.
Fit ligand to Workspace: L View
Paste: Ctrl+V
Paste by placing: Ctrl+Shift+V Zoom in: K
Undo: Ctrl+Z Zoom out: J Workspace
Open Command Script Editor: Ctrl+E Move clipping planes back: -
Create Project Table entry from Move clipping planes forward: +
contents of Workspace: Ctrl+Shift+N Move clipping planes together: F Style
Mark target entry: X Move clipping planes apart: G
Display single-entry feedback in Toggle enhanced depth view on/off: D
Workspace: S Saved Views
Stereo view: Ctrl+S
Quit Maestro: Ctrl+Q Go to previous/next scene: Ctrl+Shift+,
Open help page for active panel: F1 and Ctrl+Shift+.
Display Atoms
Open online help: Ctrl+H Finding and Selecting Atoms
Modifying Structures Find substructures or entries: Ctrl+F.
Alt+N and Alt+P select next and Representation
Toggle between local and global previous matches.
transformation: Ctrl+G
Activate atom selection tool: `
Delete selected atoms: Del
Select clicked atoms: A
Clean up geometry: Press U to perform
a quick minimization with loose Select clicked bonds, residues, chains, Labels
convergence criteria. molecules, or entries: B, R, C, M, or E,
repsectively.
Minimize structures in the Workspace:
Press Ctrl+M to perform a more Select all: Ctrl+A
thorough minimization.
Using Atom Sets Saving Views and Scenes
The Saved Views toolbar can be used Build
Save selected atoms as Atom Set 1: to save and restore specific vantage
Press Ctrl+1. Ctrl+0 through Ctrl+9 work points in the Workspace. To save and
similarly. restore the contents of the Workspace,
Select atoms from Atom Set 1: Press 1. use the Workspace > Scenes > New and
Keys 0 through 9 work similarly. Workspace > Scenes > Manage menu
items. Fragments
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