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ijrpc 2011 1 3 sathyaraj et al issn 22312781 international journal of research in pharmacy and chemistry review article available online at www ijrpc com recent trends in pharmaceutical chemistry ...

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                   IJRPC 2011, 1(3)                                  Sathyaraj et al.                                 ISSN: 22312781 
                    
                    
                   INTERNATIONAL JOURNAL OF RESEARCH IN PHARMACY AND CHEMISTRY 
                                                                                                           Review Article 
                   Available online at www.ijrpc.com 
                    
                    RECENT TRENDS IN PHARMACEUTICAL CHEMISTRY FOR DRUG 
                                                                   DISCOVERY 
                                                                       Sathyaraj A 
                             Department of Chemistry, Krishna University, Machilipatnam, Andhra Pradesh, India. 
                                                                               
                                                *Corresponding Author: arsathya.pharma@gmail.com 
                    
                    
                          ABSTRACT 
                          Pharmaceutical  chemistry  is  used  to  the  development  and  assessment  of  therapeutic 
                          compounds.  And  the  Pharmaceutical  chemistry  encompasses  drug  design,  drug 
                          synthesis, and the evaluation of drug efficacy (how effective it is in treating a condition) 
                          and  drug  safety.  Drug  discovery  is  the  core  of  pharmaceutical  chemistry.  The  drug 
                          discovery process includes all the stages of drug development, from targeting a disease or 
                          medical condition to toxicity studies in animals, or even, by some definitions, testing the 
                          drug on human subjects. The field of pharmaceutical chemistry is diverse and involves 
                          many areas of  expertise.  Natural-product  and  analytical  chemists  isolate  and  identify 
                          active components from plant and other natural sources. Theoretical chemists construct 
                          molecular  models  of  existing  drugs  to  evaluate  their  properties.  These  computational 
                          studies help medicinal chemists and bioengineers design and synthesize compounds with 
                          enhanced biological activity. Pharmaceutical chemists evaluate the bioactivity of drugs 
                          and drug metabolites. Toxicologists assess drug safety and potential adverse effects of 
                          drug  therapy.  When  a  drug  has  been  approved  for  human  studies,  clinicians  and 
                          physicians  monitor  patients'  response  to  treatment with  the  new drug. The  impact  of 
                          pharmaceutical  chemistry  on  the  normal  human  life  span  and  on  the  quality  of  life 
                          enjoyed by most people is hard to overestimate.  
                           
                          Keywords: Drug Design, Drug Synthesis, Evaluation of Drug Efficacy and Drug safety.  
                                                                                    
                   INTRODUCTION                                                     
                   Pharmaceutical  chemists  are  involved  in  the                 trained  pharmacists  and  physicians  how  to 
                   development  and  assessment  of  therapeutic                   prepare  medicinal  remedies  from  natural 
                   compounds.          Pharmaceutical         chemistry            organic products or inorganic materials. Herbal 
                   encompasses drug design, drug synthesis, and                    medications and  folk  remedies  dating  back  to 
                   the evaluation of drug efficacy (how effective it               ancient  Egyptian,  Greek,  Roman,  and  Asian 
                   is in treating a condition) and drug safety. Prior              societies   were  administered  without  any 
                   to the nineteenth century, schools of pharmacy                  knowledge  of  their  biological  mechanism  of 
                                                                                   action.  It  was  not  until  the  early  1800s  that 
                                                                                                                                     437 
                    
                 IJRPC 2011, 1(3)                              Sathyaraj et al.                             ISSN: 22312781 
                  
                 scientists began extracting chemicals from plants         between  the  drug  and  its  target  in  biological 
                 with purported therapeutic properties to isolate          systems.  Molecular  modeling  software  depicts 
                 the  active  components  and  identify  them.  By         three-dimensional     images    of  a   chemical. 
                 discovering  and  structurally  characterizing            Mathematical operations adjust the positions of 
                 compounds  with  medicinal  activity,  chemists           the  atoms  in  the  molecule  in  an  attempt  to 
                 are  able  to  design  new  drugs  with  enhanced         accurately  portray  the  size  and  shape  of  the 
                 potency and decreased adverse side effects.               drug, and the location of any charged groups. 
                                                                           Chemists can vary the atoms or groups within 
                 Pharmaceutical Chemistry in Drug Discovery                the   model  and  predict  the  effect  the 
                 and Novel Drug Delivery System                            transformation has on the molecular properties 
                 Drug  discovery  is  the  core  of  pharmaceutical        of the drug. In this way, new compounds can be 
                 chemistry. The drug discovery process includes            designed.  
                 all  the  stages  of  drug  development,  from            Advances in technology have made it possible 
                 targeting  a  disease  or  medical  condition  to         for  medicinal  chemists  to  synthesize  a  vast 
                 toxicity  studies  in  animals,  or  even,  by  some      number of compounds in a relatively short time, 
                 definitions, testing the drug on human subjects.          a process referred to as combinatorial chemistry. In 
                 Typically,  conditions  that  affect  a  larger           this  technique,  one  part  of  a  molecule  is 
                 percentage  of  the  population  receive  more            maintained,  as  different  chemical  groups  are 
                 attention and more research funding. Antiulcer            attached to its molecular framework to produce 
                 drugs  and  cholesterol-  reducing  agents  are           a  series  of  similar  molecules  with  distinct 
                 currently  the  therapeutic  areas  of  greatest          structural variations. Combinatorial libraries of 
                 emphasis. To develop a drug to target a specific          these molecular variants are thus created.  
                 disease,  researchers  try  to  understand  the           Every  chemical  that  is  synthesized  must  be 
                 biological  mechanism  responsible  for  that             tested  for  biological  activity.  In  vitro  testing 
                 condition. If the biochemical pathways leading            involves  biological  assays  outside  a  living 
                 up  to  the  diseases  are  understood,  scientists       system.  For  example,  if  the  desired  effect  of  a 
                 attempt to design drugs that will block one or            drug  is  to  inhibit  a  particular  enzyme,  the 
                 several  of  the  steps  of  the  disease's  progress.    enzyme  can  be  isolated  from  an  organ  and 
                 Alternatively, drugs that boost the body's own            studied  in  a  test  tube.  New  technologies  have 
                 defense mechanism may be appropriate.                     made  it  possible  to  assay  large  numbers  of 
                 How do chemists "discover" drugs? Often there             compounds in a short period. High-throughput 
                 is  an  existing  remedy  for  a  condition,  and         drug screening allows pharmaceutical chemists 
                 scientists will evaluate how that drug exerts its         to test between 1,000 and 100,000 chemicals in a 
                 actions. Once the drug's structure is known, the          single  day!  A  compound  that  demonstrates 
                 drug  can  serve  as  a  prototype  or  "lead             some  biological  activity  will  undergo  further 
                 compound"  for  designing  more  effective                tests,  or  it  may  be  chemically  modified  to 
                 therapeutic agents of similar chemical structure.         enhance its activity. As a consequence, chemical 
                 Lead compounds are molecules that have some               libraries  consisting  of  potentially  therapeutic 
                 biological activity with respect to the condition         compounds  are  developed.  Each  of  these 
                 under    investigation.   However,     the    lead        compounds  can  then  serve  as  leads  for  the 
                 compound may not be  effective  in  combating             development of new drugs to be screened.  
                 the disease, or it may produce undesirable side           Once  a  drug  shows  promise  in  vitro  as  a 
                 effects.  Lead  optimization  involves  chemical          therapeutic agent, it must also be screened for 
                 modifications to the lead compound to produce             toxic  properties.  Adverse drug  side  effects are 
                 a  more  potent  drug,  or  one  with  fewer  or          often  due  to  the  interaction  of  the  drug  with 
                 decreased adverse effects.                                biological  molecules  other  than  the  desired 
                 Computers      have    transformed     the   drug         target. It is very rare that a drug interacts with 
                 discovery    process.   Rational   drug    design         only  one  type  of  molecule  in  a  living  system. 
                 involves    computer-assisted    approaches     to        Drug  selectivity  refers  to  the  ability  of  the 
                 designing  molecules  with  desired  chemical             compound to interact with its target, not with 
                 properties. Rational drug design is based on a            other  proteins  or  enzymes  in  the  system.  To 
                 molecular  understanding  of  the  interactions           investigate  drug  toxicity,  animal  studies  are 
                                                                                                                         438 
                  
                    IJRPC 2011, 1(3)                                       Sathyaraj et al.                                      ISSN: 22312781 
                     
                    performed.        These      studies     also     estimate            administered a placebo. In a double-blind study, 
                    mutagenicity,  that  is,  whether  the  compound                      neither  the  physician  nor  the  patient  knows 
                    under investigation damages genetic material.                         whether the drug, a placebo, or a related remedy 
                    Rarely  does  a  drug  pass  through  a  biological                   has been administered. Therapy is monitored by 
                    system  unchanged.  Most  drugs  undergo                              an outside group.  
                    chemical transformations (in a process known as                       Phase  III  and  phase  IV  clinical  trials  involve 
                    drug metabolism) before they are excreted from                        larger  populations.  During  phase  III  trials, 
                    the  body.  The  drug  transformation  products                       which can last two to eight years, a drug is often 
                    (metabolites)  must  be  identified  so  that  their                  brought  to  market.  Phase  IV  studies  continue 
                    toxicological profiles can be determined.                             after the drug is being marketed.  
                    Since the 1970s more attention has been given to                       
                    drug formulation and methods of drug delivery.                        Combinatorial Chemistry in Drug Discovery 
                    Historically,  drugs  have  been  administered                        Combinatorial chemistry is a sophisticated set of 
                    orally,  as a  pill  or  a  liquid,  or  in  an  injectable           techniques used to synthesize, purify, analyze, 
                    form.  The  goal  of  drug-delivery  systems  is  to                  and  screen  large  numbers  of  chemical 
                    enable  controlled  and  targeted  drug  release.                     compounds,  far  faster  and  cheaper  than  was 
                    Today,  many  medications  are  commonly                              previously  possible.  The  direct  precursor  of 
                    introduced  as  inhalants  or  in  a  time-release                    combinatorial  chemistry  was  the  solid-phase 
                    formulation,        either     encapsulated         in     a          synthesis      of   polypeptides        developed  by 
                    biodegradable  polymer  or  by  means  of  a                          American biochemist Robert Bruce Merrifield in 
                    transdermal patch.                                                    the  1960s,  followed  by  the  advances  in 
                                                                                          laboratory      automation       since     then.    Initial 
                    Pharmaceutical Chemistry in Clinical Trials                           development of the  field  has  been  led  by  the 
                    Once  scientists  and  government  regulatory                         pharmaceutical industry in the search for new 
                    agencies have determined the drug candidate to                        drugs,  but  its  applications  are  spreading  into 
                    be relatively safe, it can enter into clinical trials.                other fields of chemistry. Other terms associated 
                    The clinical stage involves four phases of testing                    with  this  field  are  parallel  array  synthesis  and 
                    on  human  volunteers.  Animal  studies  and  in                      high-throughput chemistry. 
                    vitro      testing     continue        during      clinical           Whereas classical synthetic  chemistry  involves 
                    investigations       of     a    drug.     Drug-therapy               the  stepwise  synthesis  and  purification  of  a 
                    evaluation  is very  costly  and  time consuming.                     single  compound  at  a  time,  combinatorial 
                    Phase I clinical trials evaluate drug tolerance and                   chemistry  makes  it  possible  to  synthesize 
                    safety  in  a  small  group  of  healthy  adult                       thousands of different molecules in a relatively 
                    volunteers. Phase II trials continue to assess the                    short  amount  of  time,  usually  without  the 
                    drug's  safety  and  effectiveness  in  a  larger                     intermediate separation of compounds involved 
                    population. Volunteers participating in phase I                       in  the  synthetic  pathway,  and  with  a  high 
                    trials   understand  that  they  are  receiving                       degree of automation. Such procedures result in 
                    experimental  therapy.  While  those  patients                        the production of new compounds faster and in 
                    involved  in  phase  II  clinical  trials  are  made                  greater numbers than is possible with standard 
                    aware  of  the  medication  and  any  known  side                     synthetic methods. The first and still the most 
                    effects,    some  of  the  volunteers  may  be                        common  type  of  combinatorial  synthesis 
                    administered  a  placebo  (a  compound  with  no                      involves  attaching  a  molecular  species  onto  a 
                    pharmacological  activity  against  the  condition                    macroscopic substrate such as a plastic bead and 
                    being  treated)  rather  than  the  drug  being                       performing  one  or  several  well-characterized 
                    studied.  In  a  blind  study,  only  the  physician                  chemical  reactions  on  the  species.  After  each 
                    administering  therapy  knows  whether  the                           reaction, the product mixture can be split among 
                    patient is receiving the drug or a placebo. Both                      several reaction containers and then recombined 
                    groups      of    patients     are    monitored,       and            after  the  reaction  (a  procedure  called  mix  and 
                    physicians or clinicians evaluate whether there                       split),  or  else carried out in parallel containers. 
                    is  significant  improvement  in  the  condition  of                  The resulting mixture of compounds is referred 
                    the  group  receiving  the  experimental  drug,                       to  as  a  molecular library and  can  contain  many 
                    compared  with  those  individuals  who  were                         thousands  of  individual  compounds.  The 
                                                                                                                                                 439 
                     
                  IJRPC 2011, 1(3)                               Sathyaraj et al.                              ISSN: 22312781 
                   
                  analysis,  or  screening,  of  these  libraries  to         considered, as the complexity and limitations of 
                  identify the compounds of interest, along with              drug  discovery  programs  that  are  based  on 
                  their subsequent isolation and identification, can          biochemical     screens   of    large   compound 
                  be  completed  by  a  variety  of  methods.  One            collections   have    been    major    factors   in 
                  example is iterative deconvolution; it involves the         stimulating the growth of this modality. 
                  successive  identification  of  each  of  the  units         
                  backward along the chain of synthesized units.              CONCLUSION 
                  Another, called positional scanning, requires the           The field of pharmaceutical chemistry is diverse 
                  multiple  synthesis  of  a  library,  each  time            and involves many areas of expertise. Natural-
                  varying the location of a known unit along the              product  and  analytical  chemists  isolate  and 
                  chain  and  comparing  the  activities  of  the             identify active components from plant and other 
                  resulting  libraries.  More  recent  advances  in           natural  sources.  Theoretical  chemists  construct 
                  library  screening  involve  the  "tagging"  of  a          molecular models of existing drugs to evaluate 
                  substrate with tiny radio frequency transmitters            their  properties.  These  computational  studies 
                  or  unique  two-dimensional  barcodes.  Another             help  medicinal  chemists  and  bioengineers 
                  important recent advance by researchers allows              design    and    synthesize    compounds  with 
                  combinatorial  syntheses  to  be  carried  out  in          enhanced  biological  activity.  Pharmaceutical 
                  solution,  which  further  extends  the  scope  and         chemists evaluate the bioactivity  of  drugs  and 
                  utility of this field.                                      drug  metabolites.  Toxicologists  assess  drug 
                  Although      the     initial   applications     of         safety  and  potential  adverse  effects  of  drug 
                  combinatorial  and  high-throughput  chemistry              therapy.  When a drug  has  been  approved  for 
                  have occurred in the pharmaceutical field, the              human  studies,  clinicians  and  physicians 
                  same    techniques     are   now  being       used          monitor patients' response to treatment with the 
                  successfully  to  aid  in  the  discovery  of  new          new  drug.  The  impact  of  pharmaceutical 
                  catalysts,  polymers,  and  high  temperature               chemistry on the normal human life span and on 
                  superconductors.                                            the  quality  of  life  enjoyed  by  most  people  is 
                                                                              hard to overestimate.  
                  Pharmaceutical Chemistry for Drug Discovery                 Each  of  the  aforementioned  technological 
                  Significance of Recent Trends reviews the state             modalities  is  viewed  in  terms  of  practical 
                  of the art and aims to determine the significance           examples and commercial activity. Outsourcing 
                  of   technology     and     market     trends    in         arises as a prominent theme in the applications 
                  pharmaceutical      chemistry     for   advancing           realm, with special emphasis on companies with 
                  productivity  in  drug  discovery.  Although  the           primary operations in countries with developing 
                  fundamental task of medicinal chemists has not              economies,  notably  China,  India,  and  Russia. 
                  changed drastically over time, the chemical and             Among  32  companies  considered,  structure-
                  computational  tools  and  perspectives  at  their          based drug design is the most prevalent activity 
                  disposal  have  advanced  significantly.  One  in           with  most  players  emphasizing  the  fragment-
                  particular,  fragment-based  drug  design,  stands          based variation. Virtual screening is the second-
                  out  as  promising  major  improvements  in                 most  prevalent  modality,  whereas  natural 
                  research productivity.                                      products,  diversity-oriented  synthesis,  and 
                  We  examine  pharmaceutical  chemistry-related              chemogenomics appear in only a small minority 
                  approaches  and  methodologies  that  drug                  of cases. 
                  discovery organizations employ in an effort to              A  thorough  analysis  of  recent  trends  in 
                  increase  productivity  in  early  drug  discovery          pharmaceutical  chemistry  and  evaluation  of 
                  and  decrease  attrition  at  later  pipeline  stages.      their significance for advancing productivity in 
                  Key  topics  considered  include  structure-based           drug discovery is presented. 
                  drug  design,  fragment-based  drug  design,                This report includes: 
                  natural  products-based  drug  design,  diversity-              1.  A  critical  evaluation  of  chemical  and 
                  oriented  synthesis,  and  chemogenomics.  An                       computational technological modalities, 
                  overall assessment of the current and potential                     their  current  and  potential  value,  and 
                  value of these approaches is presented. Various                     their commercial manifestations. 
                  flavors of computer-aided drug design are also 
                                                                                                                             440 
                   
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...Ijrpc sathyaraj et al issn international journal of research in pharmacy and chemistry review article available online at www com recent trends pharmaceutical for drug discovery a department krishna university machilipatnam andhra pradesh india corresponding author arsathya pharma gmail abstract is used to the development assessment therapeutic compounds encompasses design synthesis evaluation efficacy how effective it treating condition safety core process includes all stages from targeting disease or medical toxicity studies animals even by some definitions testing on human subjects field diverse involves many areas expertise natural product analytical chemists isolate identify active components plant other sources theoretical construct molecular models existing drugs evaluate their properties these computational help medicinal bioengineers synthesize with enhanced biological activity bioactivity metabolites toxicologists assess potential adverse effects therapy when has been approve...

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